Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846758.1_cds_XP_016509774.1_22680
CDS Infomation

[gene=LOC107827196] [db_xref=GeneID:107827196] [protein=BTB/POZ domain-containing protein DOT3-like isoform X2] [protein_id=XP_016509774.1] [location=complement(join(2999..3367,5004..5271,5414..6297,6876..6945,7073..7203))] [gbkey=CDS]
Sequence

ATGCACAAGTCCATTCAGCTGGATCAGCCAGACAAACCCCCAAATGATTCTAATGGTACT
AACCACGTCCACAACCAACGTATAGTTGAAACTGAAACAGCTGACGGCTTCAAGAAGAAA
GAACAATCATGGTTTGCGACTTGTCAGATTCCAACTGATCTCTCAATTCAAGTTGAAGAT
GTCACCTTCCACGTTCACAAGTATCCACTGGTTTCAAAGTGTGGCTACCTAAGAACAATT
GAGCTTCCGCGGCCAAATTCACATTTAGGTTATGACCTCAAGCTTGAAAAGTTTCCAGGC
GGATCTGGAACTTTTGAGATCATATTGAAATTCTGTTATGGCCTGCCTATAAGCCTGAAC
CCTGACAATGTCGCAGCAACAAGATGTGCCTCAGAATTTCTAGATATGACCGAAGCAATG
GAAGATGGAAATTTAATTGCTAAGATAGAAGCCTTCTTCACATTTGTAGTCCTCTCATCA
TGGAATGACACCATCACTGTCCTTAGATCATGTGAGATTCTATCACCATGGGCAGAAAAC
CTTCAGATGGTTAGAAGATGTTGCGACTCAATCATTTCGAAGATTTCCAGAGGAAATTCA
GCTGAGGAGAAGCTGATTGAAGAGAATTGGTGGTTCAAAGATGTTACTAGTCTCCATATT
AACCATTTCTTACGGATAATCACAGCACTGCGGGCAAAAGAAATGAACCCTGAAATCATT
GGCTCATGTATAATATGCTACGGGGAAAAATGGTTGCCAAGCACAGACACGAAAACAGAA
GAAACGGGAAATTATGGTAACAGAATAATTGATTTTCATTTCATGAGTGGGAGGAAGCAA
GAAACGAAGATTGGACAGAATAAGGAGCGTAGGACAATCATAGAGAGTCTTGTTAGTATA
CTGCCTCCTCAAAAGGAAGCTGTTCCTTGCAAGTTCCTCCTGTGGATGTTAAAGAAGGCT
ATTGTGTATGCACCATCACCAGTCCTAGTTTTTGAGCTCGAGAAAAGAATCAGCATGGTG
CTGGAAAATGCCACGGTGAATGACCTTCTGATCCCTACTAATTCAGTAGGCGAACAAACA
ATAGATTCAACTGAAAAACAGACCATGCACAATTTAGAAGCTGTACAAAGGATTTTGGAT
TATTTCTTGATATACGAAAAACAACAGCTACAGCAACAAGGATTGAAGTCTACAGCATCG
AATATCAGTAAACTGGTTGACAGCTACCTAGCAGAAATTGCAAGTGATCCCAATGTCTCC
ATCGACAAGTTCCAAATTTTAGCTGAATCTTTGCCACTAGAAGCTCGAGCAAGTCACGAT
GGCCTCTATCGAGCCATTGATACATACCTCAAGGTTTTGTTCTCAGAGCAAGTGAAGATG
AAGGCTGCAATACAAGGGAAAGATCATATAACAAGTGATGACGAGTCAGACAAGGAAAGT
AGTCAGTCACCTTCCAAGAAGGAGGTCAAGTCCCTTAAAGAAGAACTTGAAAAAATAAAG
ATACAAATGGAAGAGCTTCAGAGGGACTACTCGGAACTGCAACACAATTATGAAAAAGTA
AACAACAAAAATACAAAAACAAGCTGGACATTTGGGTGGAGAAAGATGAAAAAATCTGCT
CATTCCAATGGAAAATTGGATAGTGAAGTAACTGAAGAAGGCCATAATAGATCAAATGTA
GGCTGCAAAGCATGCTCTCGTCGAAGGCAGTCTATATCCTAA

Peptide Sequence

PEP ID

XP_016509774.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein DOT3-like isoform X2 [Nicotiana tabacum]
Sequence

MHKSIQLDQPDKPPNDSNGTNHVHNQRIVETETADGFKKKEQSWFATCQIPTDLSIQVED
VTFHVHKYPLVSKCGYLRTIELPRPNSHLGYDLKLEKFPGGSGTFEIILKFCYGLPISLN
PDNVAATRCASEFLDMTEAMEDGNLIAKIEAFFTFVVLSSWNDTITVLRSCEILSPWAEN
LQMVRRCCDSIISKISRGNSAEEKLIEENWWFKDVTSLHINHFLRIITALRAKEMNPEII
GSCIICYGEKWLPSTDTKTEETGNYGNRIIDFHFMSGRKQETKIGQNKERRTIIESLVSI
LPPQKEAVPCKFLLWMLKKAIVYAPSPVLVFELEKRISMVLENATVNDLLIPTNSVGEQT
IDSTEKQTMHNLEAVQRILDYFLIYEKQQLQQQGLKSTASNISKLVDSYLAEIASDPNVS
IDKFQILAESLPLEARASHDGLYRAIDTYLKVLFSEQVKMKAAIQGKDHITSDDESDKES
SQSPSKKEVKSLKEELEKIKIQMEELQRDYSELQHNYEKVNNKNTKTSWTFGWRKMKKSA
HSNGKLDSEVTEEGHNRSNVGCKACSRRRQSIS

Transcript Sequence

Gene sequence data has not been registered.